Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPKVAALQANSNV--ETEIYPDGWASSLRKEVTNFYQLEE-EELIFTAGVDELIELLTRVLLDTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAID-EKTTIVWICNPNNPTGNYIDLADIQAFLDKVPS---DILVVLDEAYIEYVTPQPKKHEKLIRTYKNLIITRTFSKIYGLASARVGYGIADKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQVKLYPANGNFVLIDLGIEARTIFSYLEKNGYITRSGAALG--FPTAVRITIGKEEENSAVIALLEKLL |
| 3EUC Chain:A ((26-365)) | ------------------------VPDSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW---MSRLTDFGNLLVMRTVSK-LGLAGIRLGYVAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP-DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAASL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156778 for 2727 contacts (-57.5/contact) +
2D Compatibility (PS) -36504 + (NN) -19439 + (LL) 2240
1D Compatibility (HY) -20000 + (ID) 4450
Total energy: -234931.0 ( -86.15 by residue)
QMean score : 0.484
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