Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQKKVAILGAGSWGTGLALVLA-------DNNHKPVIWGNLDKI-----VNEINESHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQLNEALKEPTILVHVSKGIEPE--TNLRMSEVIEEEIDAAKRKALVVLSGPSHAEEVALRHPTTLCASCKDLSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVGSN---PQTFYGLTGIGDLIVTCTSVHSRNWRAGNMLGK-GENLDEVL----EKMGMVVEGVRTAKAVHGWAKKLDI--DMPITESIYAILFENKDAREAVDLLMGREKKIEKESF |
| 1X0V Chain:A ((7-353)) | -ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG----IPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYG--GRNRKVAEAFARTGKSIEQLEKELLN--GQKLQGPETARELYSILQHKGLVDKFPLFMAVYKVCYEGQPVGEFIHCLQNHPEH------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1X0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211447 for 2888 contacts (-73.2/contact) +
2D Compatibility (PS) -35159 + (NN) -15039 + (LL) 1748
1D Compatibility (HY) -20000 + (ID) 4800
Total energy: -284697.0 ( -98.58 by residue)
QMean score : 0.562
|
|
|