Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDK--KGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDYLKKLQ |
3WKM Chain:A ((95-178)) | --------------------------------------------------------------------------------------------------------------------------------VKPVVGGVKKGSPADQVGIKPGDLILEVNGKKINTWYELVEEVRKS-QGKAIKLKILRNGK-MI-EKELIPAKDPKTGTYFIGLFPK-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43197 for 563 contacts (-76.7/contact) +
2D Compatibility (PS) -8438 + (NN) -292 + (LL) 16332
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -39395.0 ( -69.97 by residue)
QMean score : 0.634
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