Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIIGIAACTSGIAHTYIAKEKLTKAGLALGHNVHIETQGTIGIEDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEINN
2R4Q Chain:A ((170-268))
AKILAVTACPTG--HTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADKQVE-MERFKGKRVLQVPVTAGIRRPQELIEKAMNQ---
General information:
TITO was launched using:
RESULT:
Template:
2R4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27429 for 745 contacts (-36.8/contact) +
2D Compatibility (PS) -10286 + (NN) -3243 + (LL) 404
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -45354.0 ( -60.88 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_2R4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R4Q-query.scw
PDB file :
Tito_Scwrl_2R4Q.pdb
: