Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTMTTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKKYDAIL-NQLEHIHRKILFEKFIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN
3MZY Chain:A ((139-197))
--------------------------------------------------------------------------------IEEFKKFSENNFSKFEKEVLT-YLIRGYSYREIATILSKNLKSIDNTIQRIRKKSEEWIK-----
General information:
TITO was launched using:
RESULT:
Template:
3MZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15103 for 359 contacts (-42.1/contact) +
2D Compatibility (PS) -6392 + (NN) -4282 + (LL) 6776
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -21201.0 ( -59.06 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_3MZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MZY-query.scw
PDB file :
Tito_Scwrl_3MZY.pdb
: