Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHIKFDYSKA-----LRFFEERELDYLEPAVKAAHDSLHNGTGAGNDALGWINLPTDYDKEEFARIKKATEKIHSDSDVLIVIGIGGSYLGARAAIETLNHSFYNVLE-KGARKTPQVFFAGNSISSSYLHDLIEVVGDRDFSVNVISKSGTTTEPAIAFRVFKELLIKKYGEEGAKKRIYATTDKAKGALKTLSDNEGYETFVVPDDVGGRFSVLTAVGLLPIAVSGVDIDALMNGAAAASKDFDKPEL-KNNIAYQYAAARNVLYRKGKVTELLISYEPGLQYFNEWWKQLFGESEGKDK--------KGIYPSSANFSTDLHSIGQYIQDGRRNLFETVIKVDKPRHNLTINKEDVDLDGLNYLAGETVDFVNTKAFEGTLLAHTDGEVPNFVVEVPELDAYTFGYLVYFFEKAVAISGYLNGVNPFDQPGVEAYKANMFALLGKPGFEDKKAELEKRLND |
| 2Q8N Chain:A ((14-457)) | --SLKFDFSNLFEPNISGGLTDEDVKSVEEKVTSAVRNFVE------NTPDFAKLDRS----WIDSVKSLEDWII-NFDTVVVLGIGGSGLGNLALHYSLRPLNWNEMTREERNGYARVFVV-DNVDPDLMSSVLDRIDPKTTLFNVISKSGSTAEVMATYSIARGILEA-YGL-DPREHMLITTDPEKGFLRKLVKEEGFRSLEVPPGVGGRFSVLTPVGLLSAMAEGIDIDELHEGAKDAFEKS-MKENILENPAAMIALTHYLYLNKGKSISVMMAYSNRMIYLVDWYRQLWAESLGKRYNLKGEEVFTGQTPVKALGATDQHSQIQLYNEGPNDKVITFLRVENFDREIVIPETG--RAELSYLARKKLSELLLAEQTGTEEALRENNRPNMRVTFDGLTPYNVGQFFAYYEAATAFMGYLLEINPFDQPGVELGKKITFALMGREGYTYEIKERSKKV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190146 for 3561 contacts (-53.4/contact) +
2D Compatibility (PS) -47128 + (NN) -22579 + (LL) -104
1D Compatibility (HY) -24800 + (ID) 6600
Total energy: -291357.0 ( -81.82 by residue)
QMean score : 0.500
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