Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNGVQPLDPVAIQIGSISVKWYGVIIASAVVIALLLALSEANKRKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKIWHGGIAIYGALIGAVLTAIIFSRIKKISFWQLADVVA---PSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLHL---------PDFIINQMYIDGAYYQ---------------PTFLYES---------LWNVLGFVILLIIR---RTKIRRGELFLGYVIWYSFGRFFIE-GMRTDSLMWGDFRVSQALSLLLIVLSIGIIIYRRLKMN----PPYYMEDKFGKVVKKK----------- |
4R1D Chain:B ((1-301)) | ------------MDKTGWITHCFGR---------FLIDLPP------DAVINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVS--VDREQHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERFGVGVTFPEHPGARFEFRSSTGAELNSLLERVDGFVQNMLSTFAGMETLRKGKHPVGSLPGEEYLVAGSDKGQRGYTFMWEV--QGKEESLTEPNLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162226 for 1630 contacts (-99.5/contact) +
2D Compatibility (PS) -25564 + (NN) 2870 + (LL) 2436
1D Compatibility (HY) 400 + (ID) 2550
Total energy: -184634.0 ( -113.27 by residue)
QMean score : 0.126
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