Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKDVGIDLGTANVLIHVKGRGI---------VVNEPAVVAINNKTGQVLAVGTEARDMVGRTPGDITAI--------------------KPM-----------------KDGVIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCPTNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIF-EPSGNMIIDIGGGTADVAVLSMGDIVT-----SQSVKVAGNKWDADILNYVKRKYNLLI-------------GERTAENIKVTIGTACQGAKEEKMEIRGRDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDRGIIMTGGGSLLHGLDELMSEQLK-VPVLITENPLDVVALGTGILLDSLTNKKRNRF |
| 3QFU Chain:A ((18-393)) | -GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD---ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMS----TRIEID--SFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEK-KD--VDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130707 for 2592 contacts (-50.4/contact) +
2D Compatibility (PS) -33273 + (NN) -13926 + (LL) 1008
1D Compatibility (HY) -6800 + (ID) 3450
Total energy: -187148.0 ( -72.20 by residue)
QMean score : 0.420
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