Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTH---SLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDN----G---------D----GLAF-----NKLP-------SN----TPQLDY------------FIDKKTKIST-DLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSE-SIEKTHWFLEKSSPEKKEIKLISK |
| 1IUP Chain:A ((24-273)) | --------------------------------------EGQPVILIHGSGPGVSAYANWRLTIPALS-K-FYR--VIAPDMVGFGFTDRPE----------------NYNYSKDSWVDHIIGIMDALE----IEKAHIVGNAFGGGLAIATALRYSE-----RVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHG------REDQVVPLSSSLRLGELIDR-A---QLHVF--GRCGHWTQIEQTDRFNRLVVEFFNEA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52495 for 1638 contacts (-32.0/contact) +
2D Compatibility (PS) -20737 + (NN) -5461 + (LL) 5268
1D Compatibility (HY) -3600 + (ID) 2200
Total energy: -79225.0 ( -48.37 by residue)
QMean score : 0.455
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