Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
2KZC Chain:A ((1-85))
GMQFKAEARRNKLMGLWVAEVLGKSGDEANAYAAEVVKADFEEAGHEDVMRKVLGDLDGKRP--EAEVRAKYEGLMAVAKAQLMDEL
General information:
TITO was launched using:
RESULT:
Template:
2KZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 37578 for 531 contacts (70.8/contact) +
2D Compatibility (PS) -8681 + (NN) -5921 + (LL) 196
1D Compatibility (HY) 0 + (ID) 750
Total energy: 22422.0 ( 42.23 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_2KZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KZC-query.scw
PDB file :
Tito_Scwrl_2KZC.pdb
: