Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----VEIKQIKAKDTQDIRHRVLRPEQP----EENAIYPNDDMEGT-------------FHLGAFEKDVLLGVASFYPEKSTVIMNPAQYRIRGVATERRMRLKGLGTALLAEGEAEIWTRGADIIWCNARIVAVGFYEKHGYRKVGKSFVIPGIGEHYLMKKVNPNKKVDQDN
1I12 Chain:A ((4-160))
LPDGFYIRRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDKKIMQYNPMVIVDKRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVEMQIRK--------------------
General information:
TITO was launched using:
RESULT:
Template:
1I12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32378 for 860 contacts (-37.6/contact) +
2D Compatibility (PS) -13822 + (NN) 755 + (LL) 884
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -50761.0 ( -59.02 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1I12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I12-query.scw
PDB file :
Tito_Scwrl_1I12.pdb
: