Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTNLIQLPGIGKKMVLMLNEIGIEEVADLRGRNPLELYEDTCDKRGERMDPCVLYTYRCAVYVAETDEAEQDVDLRKWWNWKDKQHTNERNLKNE
1T94 Chain:A ((349-401))
--LPIRKVSGIGKVTEKMLKALGIITCTELYQQR-ALLSLLFSET---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18973 for 222 contacts (-85.5/contact) +
2D Compatibility (PS) -4583 + (NN) -3205 + (LL) 3528
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -24933.0 ( -112.31 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1T94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T94-query.scw
PDB file :
Tito_Scwrl_1T94.pdb
: