Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNELEDKILAILEQHQVGVLTSVQGDYPHARYMTFLHD---GLTLYTPSGKELPKTDEVRRNP-HVSVLIGYESPGSAFLEINGLASLEEDESIKERIWENISKEWFR-GEDSPSFVVIKIVPEQIRILNSDDDGP-DTLDLIG
2QEA Chain:A ((3-140))
--ADLTHEFWDRLEDVRSGMLGIKG-Q-GRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGE-GLYADLDGTLERSTDREALDEFWSFVADAWFDGGQHDPDVCLLKFTPASGEISITEGGGARFLYEI--
General information:
TITO was launched using:
RESULT:
Template:
2QEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36383 for 900 contacts (-40.4/contact) +
2D Compatibility (PS) -14445 + (NN) -6677 + (LL) 88
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -62867.0 ( -69.85 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_2QEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QEA-query.scw
PDB file :
Tito_Scwrl_2QEA.pdb
: