Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTEKGRKETNELRDIVEVSCEKMFAGVERADLEQFTAILKNISTNIE
3BJ6 Chain:A ((12-145))
-----YQAVQATRPLLRNITAAVERGTLREGVTVGQRAILEGLSLTPGATAPQLGAALQMKRQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAIITAIRADEMAKLALFSEGFSSVELTAYHKVQLALTRFF-
General information:
TITO was launched using:
RESULT:
Template:
3BJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43625 for 852 contacts (-51.2/contact) +
2D Compatibility (PS) -14280 + (NN) -7394 + (LL) 424
1D Compatibility (HY) -400 + (ID) 1050
Total energy: -66325.0 ( -77.85 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3BJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BJ6-query.scw
PDB file :
Tito_Scwrl_3BJ6.pdb
: