Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHELESQINPENEYIIIARKPAANMD-FHEVKKSLIHVLKVGRVLKQKPNNSK
2CO5 Chain:A ((5-96))
---KYMRINYYIILKVLVINGS----RLEKKRLRSEILKRFDIDIS------DGVLYPLIDSLIDDKI--LREEEAPDGKVLFLTEKGMKEFEELHEFFKKIVCHHH-------------
General information:
TITO was launched using:
RESULT:
Template:
2CO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6749 for 597 contacts (-11.3/contact) +
2D Compatibility (PS) -9341 + (NN) 1004 + (LL) 1576
1D Compatibility (HY) -7200 + (ID) 950
Total energy: -21660.0 ( -36.28 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_2CO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CO5-query.scw
PDB file :
Tito_Scwrl_2CO5.pdb
: