Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MNNLIETIEHFLAY--SDDKLEELADKNYQLRQTIVEKEKIESREK--------------
4I1L Chain:A ((18-79))
PGCEKVFEEPEEFLKHCQADHLLDEKGKAQCLLQREVVQSLEQQLELEKEKLGAMQAHLAGK
General information:
TITO was launched using:
RESULT:
Template:
4I1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5947 for 161 contacts (36.9/contact) +
2D Compatibility (PS) -4917 + (NN) -3040 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -4860.0 ( -30.19 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_4I1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I1L-query.scw
PDB file :
Tito_Scwrl_4I1L.pdb
: