Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKWLVKASSLVVLGGMVLSAGSRVLADTYVRPIDNGRITTGFNGYP------GHCGVDYAVPTGTIIRAVADGTVKFAGAGANFSWMTDLAGNCVMIQHADGMH-SGYAHMSRVVARTGEKVKQGDIIGYVGATGMATGPHLHFEFLPANPNFQNGFHGRINPTSLIANVATFSGKTQASAPSIKPLQSAPVQNQSSKLKVYRVDELQKVNGVWLVKNNTLTPTGFDWNDNGIPASEIDEVDANGNLTADQVLQKGGYFIFNPKTLKTVEKPIQGTAGLTWAKTRFANGSSVWLRVDNSQELLYK |
4LXC Chain:B ((12-120)) | ---------------------------------LNNYKKGYGYGPYPLGINGGMHYGVDFFMNIGTPVKAISSGKIVEAG------WSNYGGGNQIGLIENDGVHRQWYMHLSKYNVKVGDYVKAGQIIGWSGSTGYSTAPHLHFQRMVNSFSNSTAQDPMPFLKSAGYGKAGGTVTPTPNTGWKTNKYGTLYKSESASFTPNTDIITRTTGPFRSMPQSGVLKAGQTIHYDEVMKQDGHVWVGYTGNSGQRIYLPVRTWNKSTNTLGVLWGTIK------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LXC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72386 for 736 contacts (-98.4/contact) +
2D Compatibility (PS) -10744 + (NN) -2345 + (LL) 3540
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -89885.0 ( -122.13 by residue)
QMean score : 0.450
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