Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIETMSLDDMREYLGQDQIPEDFDDFWKKQTMKY-QGNIEYRLDKKDFNITFAQAYDLHFKGSNDSIVYAKCLFPKTNKPYPVVFYFHGYQNQSPDWS--DQLNYVAAGYGVVSMDVRGQAGQSQDKGHFDGITVKGQIVRGMISGPNHLFYKDIYLDVFQLIDIIATLESVDSNQLYSYGWSQGGALALIAAALN--PKIVKTVAVYPFLSDFRRVLDLGGVSEPYDELFRYFKY-SDPFHKTENSVLKTLAYIDVKNFAHRISCPVVLLTALKDDICPPSTQFAIFNRLTSTKKHLLLPDYGHDPMTVQVKDYIFDQLTGSQFTKQKIE |
3FVT Chain:M ((6-299)) | ----LSLEELKKYKPKKTARPDFSDFWKKSLEELRQVEAEPTLESYDYPVKGVKVYRLTYQSFGHSKIEGFYAVPDQTGPHPALVRFHGY-NASYDGGIHDIVNWALHGYATFGMLVRGQGG-SEDTSVTPGGHALGWMTKGILSKDTY-YYRGVYLDAVRALEVIQSFPEVDEHRIGVIGGSQGGALAIAAAALSDIPKVV--VADYPYLSNFERAVDV-ALEQPYLEINSYFRRNSDP--KVEEKAFETLSYFDLINLAGWVKQPTLMAIGLIDKITPPSTVFAAYNHLETDKDLKVYRYFGHEFIPAFQTEKLSFLQKHLLL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212432 for 2556 contacts (-83.1/contact) +
2D Compatibility (PS) -31244 + (NN) -16282 + (LL) 1728
1D Compatibility (HY) -16800 + (ID) 5250
Total energy: -280280.0 ( -109.66 by residue)
QMean score : 0.533
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