Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPIISIIMGSKSDWGTMQKTAEVLDNFGIAYEKKVVSAHRAPDLMFKHAEEARGRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKTRALSGLDSLYSIVQMPGGVPVATMAIGEAGATNAALTALRILSIEDQNLADALAHFHEEQGKIAEESSNELI
3ORS Chain:F ((6-162))
-----VAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ
General information:
TITO was launched using:
RESULT:
Template:
3ORS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116602 for 1276 contacts (-91.4/contact) +
2D Compatibility (PS) -17289 + (NN) -8186 + (LL) 388
1D Compatibility (HY) -17200 + (ID) 4700
Total energy: -163589.0 ( -128.20 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3ORS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ORS-query.scw
PDB file :
Tito_Scwrl_3ORS.pdb
: