Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHGHYDDALEC----IEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGELAPIEDAKAMVE-TGIDFLAAGIGNIHGPYPANWEG--LDLDHLKKLTEAVPGFPIVLHGGSGIPDD---------------------QIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA |
2ISV Chain:B ((2-307)) | -PLCTLRQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYL-KKLCEAALEKHP-DIPICIHLDHG---DTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELG---------QNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKF----IRLAIDRVKTISD-LTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEK---------FDPRDYLGPGRDAITEMLIPKIKAFGSAGHA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ISV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129863 for 2297 contacts (-56.5/contact) +
2D Compatibility (PS) -29973 + (NN) -21760 + (LL) 1776
1D Compatibility (HY) -21200 + (ID) 5950
Total energy: -206970.0 ( -90.10 by residue)
QMean score : 0.612
|
|
|