Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLESYEEIAAYIDSTKKVVFFFTADWCPDCQFIYPVMPSIEKDFSDFVFVRVNRDDYIELAQQWNIFGIPSFVVVENGQELGRLVNKNRKT-KAEITKFLAEINHK
4POM Chain:B ((25-109))
-----------------KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKKKLEATINKLV------
General information:
TITO was launched using:
RESULT:
Template:
4POM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59625 for 568 contacts (-105.0/contact) +
2D Compatibility (PS) -9352 + (NN) -3616 + (LL) 2356
1D Compatibility (HY) -10000 + (ID) 1350
Total energy: -81587.0 ( -143.64 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_4POM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4POM-query.scw
PDB file :
Tito_Scwrl_4POM.pdb
: