Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLQDQIIKELGVKPVINPSQEIRRSVEFLKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQADEEDAQKALDFIKPDIALTINIKEAVDG-QVRALNAAGVEITDFNKGNIKARQRMISQYAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQLLAELGADKALYEKIPTADLEENKPGIADEIALGVTYQEIDAYLEGKVVSDKSRGIIENWWYKGQHKRHLPITIFDDFWK
1KQP Chain:B ((1-271))-SMQEKIMRELHVKPSIDPKQEIEDRVNFLKQYV-KKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGG-DAQFIAVRLPHGTQQDEDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRTLLKELGAPERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLEGKEVSAKVSEALEKRYSMTEHKRQVPASMFDDWWK


General information:
TITO was launched using:
RESULT:

Template: 1KQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56495 for 2215 contacts (-25.5/contact) +
2D Compatibility (PS) -29228 + (NN) -10378 + (LL) 488
1D Compatibility (HY) -19600 + (ID) 7800
Total energy: -123013.0 ( -55.54 by residue)
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_1KQP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KQP-query.scw
PDB file : Tito_Scwrl_1KQP.pdb: