Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSALLKFDFSVVRHNM---AIKLNNNFLIIMGTSFLLLLAYHIKKEGKEVLSSLFVISNFFDNSTLFFVIIVVMRVVAGTFGGRPLKTLDG-KTTRPTTDKVKGAIFNMIGPFFEGGRVLDLFSGSGSLAIEAISRGMDQAVLVEKDRRAQVVIQENIAMTKSPEQFQLLKMEANRALEQLTGQFDLVLLDPPYAKEEIVKQIQIMDSKG---------LLGDD------IMIVCETDKSVDLPEEIASFGIWKQKIYGISKVTVYVR--- |
| 1NV9 Chain:A ((15-284)) | KIWSLIRDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLHYIL------GEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKY-GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSALFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDTVFLKD-SAGKYRFLLLNRRSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106249 for 1881 contacts (-56.5/contact) +
2D Compatibility (PS) -25685 + (NN) -6752 + (LL) 1284
1D Compatibility (HY) -3600 + (ID) 1750
Total energy: -142752.0 ( -75.89 by residue)
QMean score : 0.304
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