Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRLVKIVTIIRNNKIRTLIFVMGSLILLFPIVSQVSYYLASHQNINQFKREVAKIDTNTVERRIALANAYNETLSRNPLLIDPFTSKQKE-GLREYARMLEVHEQIGHVAIPSIGVDIPIYAGTSETVLQKGSGHLEGTSLPVGGLSTHSVLTAHRGLPTARLFTDLNKVKKGQIFYVTNIKETLAYKVVSIKVVDPTALSEVKIVNGKDYITLLTCTPYMINSHRLLVKGERIPYDSTEAEKHKEQTVQDYRLSLVLKILLVLLIGLFIVIMMRRWMQHRQ |
| 3G69 Chain:B ((2-199)) | -------------------------------------------NEVIKEFDETVSQMDKAELEERWRLAQAFNATLKPSEIL-DPFTEQEKKKG-SEYANMLKVHERIGYVEIPAIDQEIPMYVGTSEDILQKGAGLLEGASLPVGGENTHTVITAHRGLPTAELFSQLDKMKKGDIFYLHVLDQVLAYQVDQIVTVEPNDFEPVLIQHGEDYATLLTCTPYMINSHRLLVRGKRIPYTAPI------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -94251 for 1518 contacts (-62.1/contact) +
2D Compatibility (PS) -21257 + (NN) -7936 + (LL) 10312
1D Compatibility (HY) -21600 + (ID) 5500
Total energy: -140232.0 ( -92.38 by residue)
QMean score : 0.507
|
|
|