Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEFTFEIVEKLLVLSENEKGWTKELNRVSFNGAPAKFDLRTWSPDHTKMGKGITLSNEEFKVILDAFRK
3SJL Chain:A ((326-347))
-----------------------------------------------AELQSGLMLDDGRVDALVAFLET
General information:
TITO was launched using:
RESULT:
Template:
3SJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -911 for 74 contacts (-12.3/contact) +
2D Compatibility (PS) -2232 + (NN) -204 + (LL) 3148
1D Compatibility (HY) -2400 + (ID) 100
Total energy: -2699.0 ( -36.47 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_3SJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SJL-query.scw
PDB file :
Tito_Scwrl_3SJL.pdb
: