Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYLAPVLTIAGTDPSGGAGIMADLKTFQARRTYGMAVVTSVVAQNT-CGVRGVQHIETAIIDQQLACVYDDIKPKAVKTGMLAERETISLVAS-YLKKYPQPYVLDPVMVATSGHRLIDSDAVEALKEDLLPLATIITPNLPEAEILVGYDLSDEVSIIKAGYDIQKQYSVRNVLIKGGHLDGLAKDY-LFLEKEGLITLSNQRINTIHTHGTGCTFAAVVAAELAKGQSILNAVSTAKSFITSAIETAPELGLGNGPVNHTSYQGD |
4C5N Chain:C ((3-264)) | ---LKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLETALS-IGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVM---------NPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123685 for 2284 contacts (-54.2/contact) +
2D Compatibility (PS) -27366 + (NN) -10146 + (LL) 988
1D Compatibility (HY) -13600 + (ID) 4850
Total energy: -178659.0 ( -78.22 by residue)
QMean score : 0.395
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