Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITLKSAREIEAMDRAGDFLASIHIGLRDIIKPGVDMWEVEEYVRRR-CKEENVLPLQIGVDGAVMDYPYATCCGLNDEVAHAFPRHYTLKQGDLLKVDMVLSEPLDKSIVDVSSLNFDNVAQMKKYTETYSGGLADSCWAYAVGEVSQEVKDLMSVTREAMYIGIEKAVIGNRIGDIGAAIQDYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEERTY |
4FO8 Chain:D ((3-253)) | -VTIKTPDDIEKMRIAGRLAAEVLEMIGEHIKPGVTTEELDRICHDYIVNEQKAIPAPLNYKG----FPKSICTSINHVVCHGIPNEKPLKEGDILNVDITVIK------------------------DGYHG---DTSKMFLVGKTPEWADRLCQITQECMYKGISVVRPGAHLGDIGEIIQKHAEKNGFSVVREYCGHGIGKVFHEEPQVLHYGRAGTGIELKEGMIFTIEPMINQGRPETRL-LGDGWTAITKDRKLSAQWEHTVLVTADGYEILTLRNDETFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136207 for 2175 contacts (-62.6/contact) +
2D Compatibility (PS) -26741 + (NN) -9689 + (LL) 2208
1D Compatibility (HY) -16000 + (ID) 4900
Total energy: -191329.0 ( -87.97 by residue)
QMean score : 0.491
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