Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLYYFIYLIKVIGNGLKLSLICGLNWLIKIVFKGQFYLFSAVFCGLLTYYMPQDIQLFTVRVLELIIMLKVIIDVTHTALSRDFKRMKTPLFLGVMYVFFLAGNSYIKAHLL-TEVMVNHLISFWLISLFFATLVIVIQPRLFKHYLLK------------KVIDKEYLGIRKFTDSLPPEINLYKDADEEDADKRMRLINQNVIKHPY-QEVVELSFLNREVITAIGYKAVPFEKETERTFIDDDTIYYPIFTVHPFRNLEGKSDFYHILMKLKLSRKAAFTKNGERLLIRDF |
4ER8 Chain:A ((1-165)) | --------------------------------------------------------------------------------MSEYRRYYIK---GGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKRDRPFEINAWVVLPE-HMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDFSAGERIIS--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ER8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70472 for 1024 contacts (-68.8/contact) +
2D Compatibility (PS) -16034 + (NN) -4812 + (LL) 12508
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -82010.0 ( -80.09 by residue)
QMean score : 0.273
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