Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEII---------------SRGYEPVVRNFGGLAVVADEGIL-----NFSLIIPDVFERKLSIS------DGYLIMVDFIRSIFSD-----FYQPIEHFEVETSYCPGKFDLSIN-GKKFAG-----LAQRRIKNGIAVSIYLSVCGDQKERSRMISDFYKIGL------GDTGSPIAYPNVDPEIMANLSDL-----LDCPMTVEDVIDRMLISLKQ--VGFNDRLLMIRPDLVAEFDRFQAKSMANKGTVSRDE |
| 4R6Y Chain:A ((1-317)) | SMESVVTVYSIDGLHDGDNSWYQVQFDAFTKATG------ITVRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFNTDTASAIPDANNLYSPLVKNY--LSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDAGFAYLGKLQANNVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMERNPNVKIFWPA-NDKGERSAL-AIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDEHYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKVTES--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77663 for 1953 contacts (-39.8/contact) +
2D Compatibility (PS) -26479 + (NN) -1157 + (LL) 580
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -116319.0 ( -59.56 by residue)
QMean score : 0.204
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