Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MS--MDWETFLDPYIQTVGELKIKLRGIRKQFRKQNRHSPI---EFVTGRVKSVESIQEKMVLRGISEENLAQDLQDIAGLRIMVQFVDDVDEVLALLRKRHDMTVVQERDYITHMKSSGYRSYHVVVEYPVDTIDGQKKVLAEIQIRTLAMNFWATIEHSLNYKYQGDFPEEIKQRLEKTAKIALELDEEMRKIREDIREAQLLFDPLNRKLSDGVGNSDDTDEFYR------ |
4KHB Chain:B ((4-189)) | MAAIESFDHIYLDLSKEPGKCRFAENGLGWKPVGGGETFTLDVSNIGGAQWSRAAGYEVKILQRT-------SGVIQLDGFQ-----QEDYERLAKIFKNWYSTNLEN--------KEHSLRGWN-----------------------------WGKAEFG---------KAELTFNVQNRPAFEIPYSEIANTNLAGRNEIAVEFAPGQVKSKKASASRDQLVEIRFYIPGTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26690 for 1159 contacts (23.0/contact) +
2D Compatibility (PS) -16631 + (NN) 949 + (LL) 5436
1D Compatibility (HY) -4800 + (ID) 950
Total energy: 10694.0 ( 9.23 by residue)
QMean score : 0.069
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