Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDFLVDGLTKSVGDKTVFSNVSFIIHSLD-RIGIIGVNGTGKTTLLDVISGELGFDGDRSPFSSANDYKIAYLKQEPDFDDSQTILDTVLSSDLREMALIKEYELLLNHYEESKQSRLEKVMAEMDSLDAWSIESEVKTVLSKLGITDLQLS-VGELSGGLRRRVQLAQVLLNDADLLLLDEPTNHLDIDTIAWLTNFLKNSKK---TVLFITHDRYFLDNVATRIFELDKAQITEYQGNYQDYVRLRAEQDERDAASLHKKKQLYKQELAWMRTQPQARATKQQARINRFQNLKNDLHQTSDTSDLEMTFETSRIGKKVINFENVSFSYPDKSILKDFNLLIQNKDRIGIVGDNGVGKSTLLN-LIVQDLQPDSGNVSIGETIRVGYFSQQLHNMDGSKRVINYLQEVADEVKTSVGTTSVTELLEQFLFPRSTHGTQIAKLSGGEKKRLYLLKILIEKPNVLLLDEPTNDLDIATLTVLENFLQGF----GGPVITVSHDRYF-LDKVANKI-IAFEDNDIREFFGNY-T-DYL-DEKAFNEQNNEVISKKESTKTSREKQSRKRMSYFEKQEWATIEDDIMILENTITRIENDMQTCGSDFTRLSDLQKELDAKNEALLEKYDRYEYLSELDT |
| 1YQT Chain:A ((24-538)) | -----EEDCVHRYGVNAF-VLYRLPVVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDS------WDGVIRAFRGNELQNYFEKLKNGEIR----------PVVKPQYVDLIPKAVKGKVIELLKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFS--------------------QPKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGERVEIERE---------------TLVTYPRLVKDYG-SFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKMLA-GVEEPTEGKIEWDLT---VAYKPQYIKADYEGTVYELLSKIDASKLNS--NFYKTELLKPLGIIDLYD-REVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHD-VLMIDYVSDRLMVFEGEPGKYGRALPPMGMREGMN--RFLASIGITFRRDPDTGRPRANKEGSVKDREQKEK--------------------------------------------------GEYYYIA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64830 for 4220 contacts (-15.4/contact) +
2D Compatibility (PS) -53163 + (NN) -22240 + (LL) 9612
1D Compatibility (HY) -18400 + (ID) 4750
Total energy: -153771.0 ( -36.44 by residue)
QMean score : 0.326
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