Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHPRPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGVIETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
| 1SQ1 Chain:A ((8-353)) | LKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRKG------------DKAQVLSGVFEGYTTGHPIAIVVF------------------------------------------------------SARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFVSNLKEE---EFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGLGEV--LYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSCNNDALKDG-----KFLSNHSGGILGGISNGENLILKTYFKPTP---------------------GRHDPCVGVRGSVVASAMVRLVLADCLLLNASANLNNLKNAYG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156950 for 2299 contacts (-68.3/contact) +
2D Compatibility (PS) -30114 + (NN) -16871 + (LL) 6916
1D Compatibility (HY) -16000 + (ID) 4650
Total energy: -217669.0 ( -94.68 by residue)
QMean score : 0.531
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