Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILVFGHQNPDSDAIGSSVAFAYLAKEAWGLDTEAVALGTPNEETAYVLDYFGVQAPRVVESAKAEGVETVILTDHNEFQQSISDIKDVTVYGVVDHHRVANFETANPLYMRLEPVGSASSIVYRMFKENGV--------SVPKELAGLLLSGLISDTLLLKSPTTHASDIPVAKELAEIAGVN-LEEYGLEMLKAGTNLSSKTAAELIDIDAKTFELNGEAVRVAQVNTVDINDILARQEEIEVAIQEAIVTEGYSDFVLMITDIVNSNSEILALGSNMAKVEAAFEFTLENNHAFLAGAVSRKKQVVPQLTESYNA |
| 2EB0 Chain:A ((1-307)) | --MRYVVGHKNPDTDSIASAIVLAYFLDCYP------ARLGDINPETEFVLRKFGVMEPELIES-AKG--KEIILVDHSEKSQSFDDLEEGKLIAIIDHHKVGL-TTTEPILYYAKPVGSTATVIAELYFKDAIDLIGGKKKELKPDLAGLLLSAIISDTVLFKSPTTTDLDKEMAKKLAEIAGISNIEEFGMEILKAKSVVGKLKPEEIINMDFKNFDFNGKKVGIGQVEVIDVSEVESKKEDIYKLLEEKLKNEGYDLIVFLITDIMKEGSEALVVGNK-EMFEKAF---VEGNSVFLEGVMSRKKQVVPPLERAYNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133845 for 2654 contacts (-50.4/contact) +
2D Compatibility (PS) -31551 + (NN) -6818 + (LL) 1200
1D Compatibility (HY) -30400 + (ID) 6000
Total energy: -207414.0 ( -78.15 by residue)
QMean score : 0.506
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