Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYTFYEYPKCTTCRSAKKELTELGLTFEAIDIKSNPPKASLLKELLENSPYDLKKFFNTSGNSYRELGLKDKFDDLTLDQALDLLASDGMLIKRPLLVKDNKILQIGY-RTKYKDLNLV
1Z3E Chain:A ((2-115))
MVTLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVE--SMPLQDLYRLINEHPGLLRRPIIIDEKR-LQVGYNEDEIRRFLPR
General information:
TITO was launched using:
RESULT:
Template:
1Z3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51524 for 776 contacts (-66.4/contact) +
2D Compatibility (PS) -12166 + (NN) -930 + (LL) 260
1D Compatibility (HY) -10400 + (ID) 1400
Total energy: -76160.0 ( -98.14 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_1Z3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z3E-query.scw
PDB file :
Tito_Scwrl_1Z3E.pdb
: