Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVRLAYQKIKEKGETSIYREIDERNPM
3BLN Chain:A ((3-127))
KNVTKASIDDLDSIVHIDIDVIGND-------SR--R-----NYIKHSIDEGRCVIVKEDNSISGFLTYDTNF----------------FDCTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKIFSSTNESNESMQKVFNANGFIRSGIVENLDEGDPEIIFYTKKLR------------
General information:
TITO was launched using:
RESULT:
Template:
3BLN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90641 for 883 contacts (-102.7/contact) +
2D Compatibility (PS) -13651 + (NN) -4548 + (LL) 2296
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -110244.0 ( -124.85 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3BLN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BLN-query.scw
PDB file :
Tito_Scwrl_3BLN.pdb
: