Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLL-TKNVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVG-KLDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWLSQEINVERIVL
1ZUW Chain:B ((2-266))
-LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDQTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGL-LNQSPIAPDHQFLTTGAR--FA-IADDWF-----VECISL
General information:
TITO was launched using:
RESULT:
Template:
1ZUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -230053 for 2327 contacts (-98.9/contact) +
2D Compatibility (PS) -26817 + (NN) -5623 + (LL) 444
1D Compatibility (HY) -28000 + (ID) 6300
Total energy: -296349.0 ( -127.35 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUW-query.scw
PDB file :
Tito_Scwrl_1ZUW.pdb
: