Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDRYILAVESSCDETSVAILKNDKELLANIIASQVESHKRFGGVVPEVASRHHVEVVTTCFEDALQEAGIVASDLDAVAVTYGPGLVGALLVGMAAAKAFAWANKLPLIPVNHMAGHLMAARDVKELQYPLLALLVSGGHTELV-YVSGPGDYKIVGETRDDAVGEAYDKVGRVMGLTYPAGREIDQLAHKGQDTYHFPRAMIKEDHLEFSFSGLKSAFINLHHNAEQKGEALVLEDLCASFQAAVLDILLAKTQKALLKYPVKTLVVAGGVAANQGLRERL-ATDISPDIDVVIPPLRLCGDNAGMIALAAAIEFEKENFASLKLNAKPSLAFEGL |
| 2VWB Chain:B ((4-305)) | ------LGLEGTAEKTGVGIVTSDGEVLFN---KTIM-----------EAADHHAETFPKLIKEAFEV--VDKNEIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDP-LTLYVSGGNTQVIAYVSKK--YRVFGETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYTV---KGMDIAFSGLLTAAMRAYDAGER------LEDICYSLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGRWMSLDETKIIPNYRTDM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200884 for 2522 contacts (-79.7/contact) +
2D Compatibility (PS) -31998 + (NN) -19229 + (LL) 2240
1D Compatibility (HY) -21600 + (ID) 5000
Total energy: -276471.0 ( -109.62 by residue)
QMean score : 0.486
|
|
|