Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKSKILLQLMQGKIVAVIRGNSQEEAFQAAQACIKGGISAIEIAYTNSKASQVIEQLVTQYTNQEQVVVGAGTVLDSETARMAILAGAKFIVSPAFNLQTAKLCNRYAIPYLPGCMTLSEVTTALEAGCEIIKIFPGGTL-GTSFISSLKAPLPQVQIMVTGGVNLTNAKDWFLSGVTAIGIGGEFNKLA--ALGEFDKITEMAKQYKIQLNLN
1WBH Chain:A ((4-214))
NWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEV--P-EAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL-
General information:
TITO was launched using:
RESULT:
Template:
1WBH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177560 for 1803 contacts (-98.5/contact) +
2D Compatibility (PS) -22655 + (NN) -13198 + (LL) -4
1D Compatibility (HY) -7600 + (ID) 2750
Total energy: -223767.0 ( -124.11 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1WBH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WBH-query.scw
PDB file :
Tito_Scwrl_1WBH.pdb
: