Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRIRKSLIFVLGVVTLICLCACTKQSQQKNGLSVVTSFYPVYSITKAVSGDLNDI-KMIRSQSGIHGFEPSSSDVAAIYDADLFLYHSHTLE-AWARRLEPSLHHSKVSVIEASKGMTLDKVHGLEDVEAEKGVDESTLYDPHTWNDPVKVSEEAQLIATQLAKKDPKNAKVYQKNADQFSDKAMAIAEKYKPKFKAAKSKYFVTSHTAFSYLAKRYGLTQLGIAGVSTEQEPSAKKLAEIQEFVKTYKVKTIFVEEGVSPKLAQAVASATRVKIASLSPLEAVPKNNKDYLENLETNLKVLVKSLNQ
1PQ4 Chain:A ((2-289))-------------------------------AMDITVSIPPQQYFLEKIGGDLVRVSVLVPGNNDPHTYEPKPQQLAALSEAEAYVLIGLGFEQPWLEKLKAANA--NMKLIDSAQGITPLEMEK-------------MVADPHIWLSPTLVKRQATTIAKELAELDPDNRDQYEANLAAFLAELERLNQELGQILQPLPQRKFIVFHPSWAYFARDYNLVQIPIE--VEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLA------ADWSSNLKAVAQKIANANS-


General information:
TITO was launched using:
RESULT:

Template: 1PQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101456 for 2085 contacts (-48.7/contact) +
2D Compatibility (PS) -27712 + (NN) -14570 + (LL) 4244
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -154144.0 ( -73.93 by residue)
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_1PQ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PQ4-query.scw
PDB file : Tito_Scwrl_1PQ4.pdb: