Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRI-DDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLLD
2FIA Chain:A ((1-157))
MKIRVA--DEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKRFATSPNYIAK--GYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQM--NRLDFGSFYLYVKELE
General information:
TITO was launched using:
RESULT:
Template:
2FIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56960 for 1147 contacts (-49.7/contact) +
2D Compatibility (PS) -16328 + (NN) -5094 + (LL) 192
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -85640.0 ( -74.66 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2FIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIA-query.scw
PDB file :
Tito_Scwrl_2FIA.pdb
: