Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEKMTNSENKRSKGFRMPGAFTILFILTIFSVLATWWIPAGSYSKLQFDTESSKLVVTDPNGKTVHVPATQTQLDKMNVKIKIKEFTSGAISKPVSVPNTYKRLKQNPAGIGSVTTSMVNGTIEAVDIMVFIMVLGGMIGVVRKSGAFESGLLALTKKTKGREFLLIFLVSLLMVLGGTLCGIEEEAVAFYPILVPIFLAMGYDSIICVGAIFLASSVGTSFSTINPFSSVIASNAAGISFTEGLSWRTAGCIAGAIFVVVYLHWYAKKIKANPEFSYSYEDRVEFNAKWGMTTNHTPSLFTIRQKIILSLFVIS--FPL-----MVWGVMSQGWWFPTMASSFLAITIIIMFLTATGANGIGERDVVDEFVNGASSLVGVSLIIGLARGINIILSQGYISDT-MLYTASKLASHVSGSV---FIIVMMFIYFVLGFVVPSSSGLAVLSMPILAPL----------ADTVGIPRSVVVMAYQFGQYAMLFLAPTGLVMATLQM-LDMKYSHWLKFVWPVVLFLLIF---GGGLLVLQVLIL---------- |
| 4HU8 Chain:A ((3-452)) | NEITLTIGQQKD----------------------------LASMVPAKFAGQELSWTSSDP--ETASVTDKG--------IVTALKFSSGGANLFLKAPATGEAIITVTAGKQSHSVKVITTVKGKEDIEK----------------------LPPLKDHFKDYFLIGNIFNNRDVSGSMM--DNDWLAHHYAILTP------------------ENHMKPSNLTNNRNET---TGEITYTFSTADRMVNAAIAEGLKIHGHTLLWHQQ----IPPWQRSMESAAKDAALSVMKKYITEVMTHYKGKI-YSWDVLNEIFPDGRGDNWTTAMRPENPWFKSIGSDFVYEAYLAARQADPNA-------ILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRLLIEGIGMQSHHNMDVPASNIRNTINRYRELG-VKISVSELDILCMGWSAFRGSTGQGADKDDMTIATNRNILDQAYKFNEYMKLYLENSDIIERVSMWGVSDRYS------WRSGGLPLLFDADNKAKPAYYSFVRAREDYEAAKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -318785 for 3519 contacts (-90.6/contact) +
2D Compatibility (PS) -42670 + (NN) 2724 + (LL) 8156
1D Compatibility (HY) -2400 + (ID) 4400
Total energy: -357375.0 ( -101.56 by residue)
QMean score : 0.101
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