Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQEALSAFDICQ----------KKVIEHGLDMKLVDVEF--TFDRNKVIFYFTADGRVDFREL---------VKDLASIFKTRIELRQI-----GVRDEAKMLGGIGPCGR------MLCCSTFLGDFEPVSIKMAKDQNL--------------SLNPTKISGLCGRLMCCLKY-ENDEYETAKEQLPDIGEMITTANGPAKVVGLNILERVLQVELINREKV-----IEYTWEELLEEGVVSAQTTD------------- |
| 1SRQ Chain:A ((4-339)) | -----KVKLECNPTARIYRKHFLGKEHFNYYSLDT----ALGHLVFSLKYDVIGD-QEHLRLLLRTKCRTYHDVIPISCLFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47660 for 1715 contacts (-27.8/contact) +
2D Compatibility (PS) -28318 + (NN) -1615 + (LL) 1120
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -85573.0 ( -49.90 by residue)
QMean score : 0.235
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