Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDHPLIEELE-KETKNIRFFDDIYEKHDQFEAVYEEIADILFEAA-RREDVVYAVPGHPFVAEKTVQLLTERQEKENVQ--------------------VKVAGGQSFLDATFNVLQIDPIEG--FQFVDAGT--LS--ADEL---ELRH-HLIICQVYDQ---MTASEVKLTLMEKLPDDYEVVIVTAAGSRGEEIRTVPLFELDRNVALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGPNGCPWDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAEKNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEMKEFSSEVSEAPHEHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS |
2ZVB Chain:A ((2-247)) | --GELFLVGMGPGDLPGLTQRAREALEGAEVVIGYSTYVKLLEEMGLLAGKEVVRKGMT----EE-----LDRAEEALERALSGQRVALVSGGDPGIYG-MAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHDTCLISLSDLLTPWPLIERRLHAAGQGDFVVVLYNPQSKRRDWQLRKSAEILLEYRPKETPAALVKSAYRKRQEVALTTLEGLREA-EAGMLTTVVIGNRQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZVB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113673 for 1670 contacts (-68.1/contact) +
2D Compatibility (PS) -23285 + (NN) -11327 + (LL) 21860
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -131975.0 ( -79.03 by residue)
QMean score : 0.465
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