Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELP--GGSTGLVHISEVADNYVKDINDHLKVGDQVEVKVINVEK-DGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
3AEV Chain:A ((9-92))
--PEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKA---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3AEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38488 for 536 contacts (-71.8/contact) +
2D Compatibility (PS) -8517 + (NN) -482 + (LL) 1652
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -54585.0 ( -101.84 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_3AEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AEV-query.scw
PDB file :
Tito_Scwrl_3AEV.pdb
: