Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLKHFIQDALSSWMKQKGPESDIVLSSRIRLARNFEHIRFPTRYSNEEASSIIQQFEDQFSEQEIPGIGKFVLIRMNDAQPLEKRVLVEKHLISPNL-----------TES-PFGGCLLSENEEVSVMLNEEDHIRIQCLFPGFQLLEAMKAANQ----VDDWIEEK-VDYAFNEQRGYLTSCPTNVGTGLRASVMMHLPALVLTRQINRIIPAINQLGLVVRGIYGEGSEAVGNIFQISNQITLGKSEQDIVEDLNSVAAQLIEQERSAREAIYQTSKIELEDRVYRSYGVLSNCRMIESKETAKCLSDVRLGIDLGIIKGLSSNILNELMILTQPGFLQQYSGGALRPNERDIRRAALIRERLHLEMNGKRQEDESI |
3L2D Chain:A ((132-381)) | -------------------FEDKYVKSCRIRCGRSVKGVCLPPAMSRAERRLVEKVVSDALGGLK--GDLAGKYYPLTTMNEKDQEQLIEDHFLFEKPTGALLTTSGCARDWPDGRGIWHNNEKNFLVWINEEDHIRVISMQKGGDLKAVFSRFARGLLEVERLMKECGHGLMHNDRLGYICTCPTNMGTVVRASVHLRLAFLEKHP---RFDEMLGKLRLGKRGTGGESSLATDSTYDISNWARLGKSERELVQVLVDGVNLLIACDKKLEAG---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101847 for 1786 contacts (-57.0/contact) +
2D Compatibility (PS) -24984 + (NN) -8295 + (LL) 9524
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -139202.0 ( -77.94 by residue)
QMean score : 0.544
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