Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQIGYVRHYQK-ELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIREISESKKASILSFLTRFIGAPPWKQDIQHLIYRFCVELTRGGFTHRHRQSLAVLFQMLTGN-EYGVRNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL |
4PW0 Chain:A ((13-283)) | -------TAPTQYIEVNGTRYAYRSLGAP-SDIPLICFQHFTGTLDN-WDP-LITNGLSKGRQLIIFDNKGVGLSSGTT----PDNVAAMTADALEFITAL----GIRYFDVLGFSLGGFIVQYMAHIQPDMIRKIIIVGAAPQGVKVLHT-FPDLIARAMQ-----LEPKERF-----L--------FIFFEQSEHSRSKGLA--TL---GRLYERTTDRDQDASA---QAIGAQLTAI-TNWGKKTPSFEITSIQHPVFVVQGSNDEMMDTYNSYELFKQL--PDAILSLYPDAAHGSFYQYPELFVSQTEYFLDSY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121302 for 2375 contacts (-51.1/contact) +
2D Compatibility (PS) -28357 + (NN) -7590 + (LL) 4132
1D Compatibility (HY) -7600 + (ID) 1900
Total energy: -162617.0 ( -68.47 by residue)
QMean score : 0.382
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