Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVLSFMDVKRQKDFELEKNLLKELSLRQIIQSVKDCLEPLFPFLHDERDIITEGCIDFAIEAYLLGGRFGIFGYYGESMQSISARSAREEEELRMEFFDYLYNWIHEQYATFDKNTVYEAARKFIKDWWTAGFVQREKQCKLRMR
2KSF Chain:A ((396-502))
-------------------MVQIQGSVVAAALSAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSV-----------------VATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQA----
General information:
TITO was launched using:
RESULT:
Template:
2KSF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16597 for 729 contacts (-22.8/contact) +
2D Compatibility (PS) -11364 + (NN) -2040 + (LL) 3608
1D Compatibility (HY) -7200 + (ID) 450
Total energy: -34043.0 ( -46.70 by residue)
QMean score : 0.245
(partial model without unconserved sides chains):
PDB file :
Tito_2KSF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KSF-query.scw
PDB file :
Tito_Scwrl_2KSF.pdb
: