Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIYGIYMDRPLSQEETDRLMSFVSAEKREKCRRFYHKEDAHRTLLGDVLVRSVISEQYQLNKADIRFSAQEYGKPCIPDLPNAHFNISHSGHWVIGAFDSDPIGVDIEKMKPIS------LGIAERFFSKNEYSDLLSKH-KDEQNDYFYHLWSMKESFIKQEGKGLS-LPLDSFSVRLHEDGRVSVELPEHHTPCFIKTYEVDPGYKMAVCAARPDFPEDITMISYEALL |
5CXD Chain:A ((5-119)) | ----------------------------------------------------------------------------------------------------IHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTG--HVAFNDIDCYNDELGKPKID--YEGFIVHV-SISHTEHYAMSQVVLEK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33677 for 728 contacts (-46.3/contact) +
2D Compatibility (PS) -11648 + (NN) -5795 + (LL) 8320
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -48600.0 ( -66.76 by residue)
QMean score : 0.332
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