Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLVRMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSRSGTPVEEAQQKTIEAITKAINYMAKRRIGALLTIERDTGMGDYIETGIPLNAKVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFISKELGTRH-RAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLEAEFKKNTRDTSSNRWYWRGKKNG |
3OHG Chain:A ((183-230)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQNTHPRTSVGLSQDRKTMYVFVVDGRRKDS-----FFALGLTLPHLATMMKA---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3794 for 236 contacts (-16.1/contact) +
2D Compatibility (PS) -5166 + (NN) -3165 + (LL) 18476
1D Compatibility (HY) -4000 + (ID) 650
Total energy: 1701.0 ( 7.21 by residue)
QMean score : 0.305
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