Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MRLNRQFIRTQLIAQNILSKNAPAKRENATENPAAVLEKAYSRLKSQSSTGGINQFNYSKTSVSGNSGTFSKVYQSAND-------RTVTDT---------GEETVIQSQNP--YESESDIRIKILDEKYSRMNAINKTKSDPLGYIKDKYQNSKSPYFRSDLSAA-----ERQAAYDNETEWLFKGKAQNYNLQDAVFRNVTFHGEVEAENEKV------YQRGQVNQQLQVLLNRNHIHIP-------EGTELTFT----ITPIDYQVRVSGTDDQDLIK--QIEQVLQSGDNSKELFLHIMKSQSSDSAQFSEEAYKKYQAAREMYEVTGYHLKDL------------EVIDGRYVTPEGRDLMDVYKEELE----KDPV---QKQTASYAISYYRSELSKI---AEAGYNAIPDFILSIDYSNGSLRDVGQSKSYGTGDTGWLEALKRQTGVNY---- |
| 4ZKD Chain:A ((7-499)) | IDIHSFIATHPLNLTCLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERENGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVIDCNYDSWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILLNKADLISWDKHRLEMIQSELNYVLKE---NFQWTDAEFQFIPCSGLLGSNLNKINYVPEWYEGPTFFSQLYLLVEHNMNKIETTLEEPFVGTILQSSVLQPIAEINYVSLKVLINSGYIQSGQTIEIHTQYEDFHYYGIVSRMKNSKQILETNTKNNISVGLNPDILEVLVKIHNTEDFTKKQFHIRKGDIIIHSRKTNTLKLLALRLIKLSIQTHALSDPVDLGSELLLYHNLTHNAVKLVKILGTNDISINPNQSLIVEVEIIEPDFALNVIDSKYITNNIVLTSIDHKVIAVGRIACQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 140741 for 2934 contacts (48.0/contact) +
2D Compatibility (PS) -40664 + (NN) -1104 + (LL) 328
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: 82251.0 ( 28.03 by residue)
QMean score : 0.052
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